Source code for cobra_component_models.orm.reaction_name
# Copyright (c) 2019, Moritz E. Beber.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Provide a reaction name ORM model."""
from sqlalchemy import Column, ForeignKey, Integer, UniqueConstraint
from .base import Base
from .mixin import NameMixin
[docs]class ReactionName(NameMixin, Base):
"""
Define a reaction name ORM model.
Attributes
----------
reaction_id : int
The SBML reaction being annotated.
"""
__tablename__ = "reaction_names"
reaction_id: int = Column(Integer, ForeignKey("reactions.id"), nullable=False)
__table_args__ = (UniqueConstraint("reaction_id", "namespace_id", "name"),)
[docs] def __repr__(self):
"""Return a string representation of the object."""
return (
f"{type(self).__name__}(reaction={self.reaction_id}, "
f"name={self.name}, "
f"namespace={self.namespace_id})"
)